BigHugger
sk Skill · K-Dense-AI

uniprot-rcsb

Retrieve protein sequences, annotation, and structures from UniProtKB, the RCSB PDB, and AlphaFold DB. Use this skill to resolve a gene or protein name to a UniProt accession, pull sequences and FASTA files, find binding sites and domains, search the PDB by UniProt accession, sequence, ligand, or text, download mmCIF/PDB coordinates and biological assemblies, fetch AlphaFold models with their pLDDT confidence, and…

installs 8w
0
30-day movement
starts with the next reading
Related entries
1
Connections
1
bashPython
Host repository
K-Dense-AI/drug-discovery-agent-skills
Version
1.0
Allowed tools
Read Write Edit Bash
Compatible with
Requires Python 3.10+ and outbound HTTPS access to rest.uniprot.org, search.rcsb.org, data.rcsb.org, files.rcsb.org, and alphafold.ebi.ac.uk. The bundled scripts use only the Python standard library and need no API key or account.
Licence
MIT
Host stars
30
Host language
Python