BigHugger
sk Skill · K-Dense-AI

immunogenicity

Estimate how likely a protein therapeutic is to provoke an anti-drug antibody response, and locate the sequence regions responsible. Use this skill to tile a sequence into peptides, predict class II MHC presentation across a population-representative allele panel, aggregate predicted binders into a per-region and whole-molecule risk score, compare a candidate against its closest human germline, and decide which…

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Connections
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bashPython
Host repository
K-Dense-AI/drug-discovery-agent-skills
Version
1.0
Allowed tools
Read Write Edit Bash
Compatible with
Requires Python 3.10+. The bundled scripts tile sequences, parse NetMHCpan/NetMHCIIpan output, which is free for academic use but requires a signed licence and is not redistributable.
Licence
MIT
Host stars
30
Host language
Python