BigHugger
sk Skill · PKU-YuanGroup

solublempnn

Inverse-fold a backbone with SolubleMPNN — ProteinMPNN retrained on a soluble-PDB subset (Dauparas et al. 2022) — for sequences biased toward cytosolic expression and reduced aggregation. Reach for this skill when designs from vanilla ProteinMPNN are aggregating or going to inclusion bodies, when redesigning a membrane-adjacent fold for soluble expression, or when an E. coli expression screen is the next step.

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bashPythonbiomodels
Host repository
PKU-YuanGroup/OpenAI4S
Category
biomodels
Licence
Apache-2.0
Host stars
552
Host language
Python